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Waiver of Interest and Penalty in terms of Section 128A of CGST Act

Brief: Section 128A of CGST Act provides for waiver of interest or penalty or both relating to demand under Section 73 of CGST Act pertaining to period July 2017 to March 2018, FY 2018-19, FY 2019-20. The said provision shall be effective from 1 November 2024.

Timeline for payment – Notification No- 21/2024- Central tax dated 8 October 2024

CBIC vide captioned notification, has notified the date up to which tax is payable as per the notice, or statement or Order, by specified class of person for waiver of interest or penalty under Section 128A of CGST Act. This notification shall come into effect from 1 November 2024. The date of payment of tax corresponding to class of registered person is summarized as below:

Sr. No.

Class of registered person

Date up to which tax can be paid to the avail the benefit of Section 128A of CGST Act

1

In case where a notice or statement or order, referred to in Clause (a) or (b) or (c) of sub-section 1 of the section 128A of CGST Act, has been issued

31 March 2025

2

In case where a notice is issued under Section 74 (1) of CGST Act and an Order is passed by the officer pursuant to direction of Appellate Authority or Appellate Tribunal or a Court, the said notice or Order shall be considered as the one referred to in clause (a) or (b)

Date ending on completion of six months from the date of issuance of order by the proper officer redetermining tax under section 73 of the Act

Rule prescribing procedure- Notification No. 20/2024 -Central Tax dated 8 October 2024:  

CBIC vide captioned notification introduced Rule 164 of CGST Rules wherein the procedure for filing application and conditions for closure of proceedings under Section 128A of CGST Act has been laid down. A summary of the same is as below:

Particulars

Form and due date of filing

Mode of Payment

Waiver of interest or penalty or both in respect of a Notice or a Statement- Section 128(1)(a) of CGST Act

GST SPL-01 on or before 30 June 2025

DRC-03

Waiver of interest or penalty or both in respect of Order passed by the officer under Sec 73(9) of CGST Act or Order passed by first appellate authority- Section 128(1)(b) & (c) of CGST Act

GST SPL-02 on or before 30 June 2025

Crediting the amount in Electronic liability register i.e. the procedure similar to payment of pre-deposit for filing appeal before tribunal

In case payment is already made through DRC-03, an application in DRC-03A is to be filed

Waiver of interest or penalty or both in case where initially notice was issued u/s 74 of CGST Act. However, Appellate Authority or Tribunal or Court has directed the officer to redetermine the tax as if demand notice is issued u/s 73 of CGST Act

GST SPL-02 within 6 months from the date of communication of Order redetermining tax u/s 73 of CGST Act

Same as mentioned for Sec 128(1)(b) &(c) of CGST Act

Remarks:

  1. Separate application needs to be filed against each Statement, Notice or Order
  1. The amount of ITC denied on account of Section 16(4) of CGST Act, which is now available in terms of Section 16(5) or (6) of CGST Act is to be deducted while filing application under captioned section. Also, a separate application for rectification is not required to be filed
  1. At the time of filing the application, document evidencing withdrawal of appeal or writ petition, if any filed before any Appellate Authority, or Tribunal or Court, as the case may be needs to be uploaded. In case, the order for withdrawal has not been issued by the concerned authority till the date of filing of the application, applicant is required to upload copy of application for withdrawal of appeal or writ petition. Subsequently, copy of Order is required to be uploaded within 1 month of issuance of Order of withdrawal by concerned authority

Key points:

  1. In case where a statement, SCN or Order involves multiple period, including the period covered under Section 128A, in order to file the application under captioned Section, the tax demand as per the said statement, SCN or Order has to be completely discharged before the date mentioned above. Further, the interest or penalty or both pertaining to the period other than covered under captioned Section, will be required to be discharged within 3 months from the date of issuance of Order in Form GST SPL-05 or Form GST SPL-06.
  1. In case officer is of the view that the application in Form GST SPL-01 or Form GST SPL-02, is liable to be rejected, he shall be issuing a notice in Form GST SPL-03 within 3 months from date of receipt of application. Further, an opportunity of being heard is to be provided before issuance of notice.
  1. A reply against the notice in Form SPL-03 is to be filed within 1 month from the date of receipt of notice in Form GST SPL-04.
  1. In case the reply is found satisfactory, the officer shall issue an Order in Form GST SPL-05. If the same is found unsatisfactory, the officer shall issue an Order in Form GST SPL-07 rejecting the application. The timeline to issue Order by officer is 3 months from the date of receipt of reply in Form GST SPL-04. In case reply is not filed by the taxpayer, the Order is to be issued within 4 months from the date of issuance of notice in Form GST SPL-03.
  1. If an Order in Form GST SPL-05 or Form GST SPL-07 is not issued within the timeline discussed above, the application shall be deemed to be approved and the proceedings shall be deemed to be concluded.

Also Read: Interpretation of the term ‘as is’ or as is, where is basis’ for GST regularization of the past period transactions

  1. In case an appeal has not been filed against the Order passed in Form GST SPL-07 within 3 months from the date on which such Order is communicated, the original appeal filed by applicant (which are earlier withdrawn for filing application in Form GST SPL-02) against the Order mentioned in Clause (b) or (c) of Section 128(1A) shall stand restored.
  1. Appeal can be filed against the Order in Form GST SPL-07 rejecting the application for waiver, within 3 months from the date of communication of Order in terms of Section 107 (1) of CGST Act. However, the subject matter of such appeal shall be restricted to applicability of waiver of interest or penalty under Section 128A and not the merits of original notice/statement/Order.
  1. If the appellate authority held that the officer has wrongly rejected the application, the said appellate authority shall pass an Order in Form GST SPL-06. However, if the appellate authority held that the application was rightly rejected, the applicant has to file an undertaking in Form GST SPL-08 stating that he has neither filed nor intends to file appeal against the order of appellate authority in APL-04, within 3 months from the date of issuance of order in form GST APL-04.  
  1. In case wherein any additional amount of tax becomes payable in light of the appeal filed by department, and if the said additional tax is not paid within 3 months from the date of Order passed by Appellate Authority or Tribunal or Revisional authority, as the case may be, the Order passed in Form GST SPL-05 or Form GST SPL-06 shall become void.
  1. If the taxpayer is required to pay any amount of interest or penalty or both on account of demand pertaining to the period other than the period covered under the captioned section and the details of the same is mentioned in form GST SPL-05 or 06 (Column 19 and 20), the same shall be paid within 3 months from the date of issuance of Order in Form GST SPL-5 or 06, else the said Order shall become void. 

Circular: CBIC has issued the circular No. 238/32/2024-GST dated 15 October 2024 to clarify on certain aspects related to waiver of interest or penalty under captioned section. Key clarifications are captured below:

Sr No.

Issue

Clarification

1

Whether benefit under captioned section shall be available, wherein the tax component has been paid before the date on which said section has come into effect

As long as the amount has been paid on or before or the notified date i.e.31 March 2025, the said payment of tax shall be considered for benefit under captioned section

2

Whether amount recovered by tax officers as tax due from any person on behalf of taxpayer, against a particular demand can be considered as tax paid under captioned.

Yes subject to the recovery being made on or before the notified date i.e. 31 March 2025.

3

Whether interest or penalty or both recovered by the officer towards the demand under section 73 pertaining to the period covered under section 128A can be adjusted against the tax amount payable under captioned section

No. Since the refund of interest or penalty is not available, the same cannot be adjusted towards tax payable under captioned section.

 

4

Whether the benefit under captioned section will be applicable in cases where tax amount has already been paid and the notice or order is for interest and/or penalty involved

Yes. However, the said interest and/or penalty shall not be related to delay filling of returns or delay in reporting of any supply. 

5

Whether the benefit under captioned section can be availed if the taxpayer intends to avail partial waiver of interest or penalty or both, by making part payment of amount demanded in notice/statement/order and opts to litigate for remaining issues

No. The benefit can only be availed if the full amount of tax demanded in the Notices/statement/order is paid.

6

Whether taxpayer can apply for the benefit under captioned section where the notice or order involves multiple periods including the period for which benefit is available. 

 

Yes, the benefit can be availed provided the taxpayer makes the full payment of tax demanded in the notice/statement/order. Further, the benefit of waiver of interest & penalty shall be available only for the period covered under captioned section.

With respect to payment of interest or penalty or both for tax period not covered under captioned section, the same is to be paid with 3 months from the date of issuance of order in Form GST SPL-05 or 06 

7

Whether the benefit under captioned section is available for matters involving IGST and compensation Cess

Yes subject to full payment of tax which includes the payment of IGST, CGST, SGST and Compensation Cess demanded in the notice/statement/Order

8

Whether the benefit under captioned section will cover waiver of penalties under other provisions, late fee, redemption fine etc

Late fee, redemption fine etc. are not eligible for waiver under Section 128A

9

Whether payment to avail waiver under captioned section can be made by utilizing ITC

Yes. However, in case where demand is pertaining to RCM liability or by the Ecommerce operator under Sec 9(5) of CGST Act, demand is to be paid by debiting electronic cash ledger

10

Whether the benefit of captioned section can be availed qua import IGST payable under the Customs Act, 1962?

No, since in such cases demand would have been raised under Customs Act and not under Sec 73 of CGST Act

Latest Update with respect to March 2025:

Advisory related to amnesty scheme in terms of Section 128A of CGST Act:

A recent advisory has been uploaded on GSTN portal with respect to issues faced while filing the application under section 128A of CSGT Act. Also, it is clarified that the due date for payment of tax under amnesty scheme is 31 March 2025 and the same is to be paid through electronic liability register. In case of any difficulty faced during payment, the same can be paid through DRC-03 under category ‘Others’. After completing the payment, Form DRC-03A can be submitted to link the payment made in DRC-03 towards the relevant demand order. Further, it is emphasised to note that the application in Form SPL 01 & Form SPL 02 is to be filed with 3 months from the date of payment i.e. on or before 30 June 2025.

With respect to following issues faced, it is advised to raise grievance ticket immediately so that the same can be resolved:

  • Order Number is not available in dropdown for selection in SPL 02
  • Order details are not getting auto populated after selection of a particular order in SPL 02
  • Payment details are not getting auto populated in table 4 of SPL 02
  • After filing the SPL 02 for a demand order, the taxpayer is not able to make payment using the “Payment towards Demand” for that order. Also, taxpayer is not able to adjust the amount paid through DRC 03, against the same demand, using DRC 03A
  • Not able to withdraw the Appeal applications (APL 01) filed  before first appellate authority against a particular order

Deadline for payment under GST amnesty scheme is fast approaching, let’s understand how the recently issued Notification & Circular will further ease the burden on taxpayers

Notification No. 11/2025 – Central Tax dated 27 March 2025

CBIC vide captioned notification has amended the following Rule under CGST Rules, 2017:

Rule 164: Procedure and conditions for closure of proceedings under section 128A in respect to of demand issued under section 73 of CGST Act

  • First amendment pertains to Sub-rule (4) of Rule 164 of CGST Rules. The same is in light of the condition for payment of taxes for the period not covered under the amnesty scheme. Pursuant to said amendment, the payment of tax is to be paid in full only for the period covered under amnesty scheme. Hence, in cases where the SCN/Order covers the period beyond FY 2019-20, the tax is to be paid only for the period until FY 2019-20.  
  • Further, the explanation inserted below sub-rule (4) provides that in case where tax, interest and penalty for the period beyond FY 2019-20 has been paid, prior to issuance of captioned notification, the same shall not be refunded.
  • Second amendment pertains to Sub-rule (7) of Rule 164 of CGST Rules. Vide said amendment, 2nd Proviso along with an explanation has been inserted in the Sub-rule (7). In light of said amendment, where the SCN/Order includes the period for which amnesty benefit is not available, applicant instead of withdrawing the appeal shall intimate that he do not wish to peruse the appeal for the period covered under amnesty scheme. Accordingly, the officer can pass an Order for the period other than the period covered under amnesty. 
  • The appeal shall be deemed to be withdrawn, to the extent of said intimation, for the period from the 1 July 2017 to the 31 March 2020 or part thereof, for the purpose of sub-clause (3) of section 128A.

Circular No. 248/05/2025 -GST dated 27 March 2025

Additionally, CBIC vide captioned circular has clarified the following issues:

  1. Whether the cases where tax has been paid through return in Form GSTR-3B instead of through Form GST DRC-03, prior to 1 November 2024 i.e. introduction of Section 128A, would be eligible for the benefit under amnesty scheme:

    In order to clarify the above, reference has been made to circular no. 238/32/2024 dated 15 October 2024. It was clarified that any amount paid prior to 1 November 2024 shall be considered as payment made towards the tax payable towards the demand raised under Section 73 of CGST Act.

    Also, a reference is made to Rule 164(2) of CGST Rules, which provides for procedure in to be followed for cases where payment has already been made through Form GST DRC-03.

    In light of the above background, it is clarified that where the payment of tax has been made through Form GSTR-3B prior to the issuance of demand notice and/or adjudication order before the date 1 November 2024, shall also be eligible for benefit under section 128A of the CGST Act, subject to verification by the proper officer.
    1. Whether (i) the entire amount of tax demanded is required to be discharged and (ii) the appeal is required to be withdrawn for the entire period, where notices/statements/orders issued to taxpayers, pertains to period covered partially under section 128A and partially outside it.

      In light of the amendment made in Rule 164(4) and proviso inserted in Rule 164(7) of CGST Rules, in case where tax has been discharged for the period covered under amnesty scheme, application can be filed in Form SPL-01 or Form SPL-02. Also, an intimation can be filed stating that the taxpayer does not intend to peruse appeal for the period covered under amnesty scheme.

    Additionally, it is clarified that point 6 of the table at para 4 of the circular no. 238/32/2024 -GST dated 15 October 2024 dealing with payment of tax for the period including the period not covered under the amnesty scheme, has been withdrawn.

    Disclaimer: This article provides general information existing at the time of preparation and we take no responsibility to update it with the subsequent changes in the law. The article is intended as a news update and Affluence Advisory neither assumes nor accepts any responsibility for any loss arising to any person acting or refraining from acting as a result of any material contained in this article. It is recommended that professional advice be taken based on specific facts and circumstances. This article does not substitute the need to refer to the original pronouncement

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